CDS
| Accession Number | TCMCG051C37779 |
| gbkey | CDS |
| Protein Id | XP_024439929.1 |
| Location | complement(join(11916143..11916255,11916379..11916430,11918013..11918096,11921285..11921484,11921963..11922053)) |
| Gene | LOC18104389 |
| GeneID | 18104389 |
| Organism | Populus trichocarpa |
Protein
| Length | 179aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA17973 |
| db_source | XM_024584161.1 |
| Definition | E3 ubiquitin-protein ligase RNF170 isoform X2 [Populus trichocarpa] |
EGGNOG-MAPPER Annotation
| COG_category | S |
| Description | Protein of unknown function (DUF1232) |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko04121 [VIEW IN KEGG] |
| KEGG_ko |
ko:K15707
[VIEW IN KEGG] |
| EC |
2.3.2.27
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway | - |
| GOs |
GO:0007275
[VIEW IN EMBL-EBI] GO:0008150 [VIEW IN EMBL-EBI] GO:0009790 [VIEW IN EMBL-EBI] GO:0009792 [VIEW IN EMBL-EBI] GO:0032501 [VIEW IN EMBL-EBI] GO:0032502 [VIEW IN EMBL-EBI] GO:0043009 [VIEW IN EMBL-EBI] GO:0048856 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGATGGACCTCCAGGGAACGATTGTTGCGCCATATGCCATGGACACTTCAACATTGCTTGCCAGGCCAATTGCTCTCATTGGTTTTGCGGTGATTGTATTATGCTTGTTTGGCATCATGGATCTGTACTCCAGCCATGTAAATGTCCGCTGTGTCGTCGACAGATTACATTGTTGGTTCCTGGTGAAGCTTCATTAAGGGAGCGCAATGATCCTCATGTTGCTGAGGTTCTTGGAAAAATTGAAAGATACAATCATCTTTTTGGTGGAAATACCAGTAGTCTTGTTCAGAGAATGCAAGACCTTCCATTTCTTCTCCGGAGGTTGTTGCGAGAAATAATGGATCCCCAAAGATCTCTTCCTGTGGTCATCAAGATGGTATTAAGTGCTGTCTACATCATCAGCCCTGTAGACATTATTCCAGAAGGAATTTTGGGAATAGTTGGTCTCTTGGATGATCTCCTCATAGTGCTCATCTGCTTTCTTCATGTTGCTGCCATCTACCGGTCAGTGCTCTATTATCGTCATGGAGGTTCTTGA |
| Protein: MDGPPGNDCCAICHGHFNIACQANCSHWFCGDCIMLVWHHGSVLQPCKCPLCRRQITLLVPGEASLRERNDPHVAEVLGKIERYNHLFGGNTSSLVQRMQDLPFLLRRLLREIMDPQRSLPVVIKMVLSAVYIISPVDIIPEGILGIVGLLDDLLIVLICFLHVAAIYRSVLYYRHGGS |